Index _ | A | B | C | D | E | F | G | H | I | L | M | N | O | P | Q | R | S | T | U | V | W | Z _ __iter_indexes() (imsegm.classification.CrossValidateGroups method) __steps() (imsegm.classification.CrossValidate method) _asdict() (imsegm.utilities.read_zvi.ImageTuple method) (imsegm.utilities.read_zvi.ZviImageTuple method) (imsegm.utilities.read_zvi.ZviItemTuple method) _check_color_image() (in module imsegm.descriptors) _check_color_image_segm() (in module imsegm.descriptors) _check_exist_paths() (imsegm.utilities.experiments.Experiment method) _check_gray_image_segm() (in module imsegm.descriptors) _check_unrecognised_feature_group() (in module imsegm.descriptors) _check_unrecognised_feature_names() (in module imsegm.descriptors) _create_folder() (imsegm.utilities.experiments.Experiment method) _draw_disk() (in module imsegm.utilities.drawing) _ellipse() (in module imsegm.utilities.drawing) _evaluate() (imsegm.utilities.experiments.Experiment method) _fields (imsegm.utilities.read_zvi.ImageTuple attribute) (imsegm.utilities.read_zvi.ZviImageTuple attribute) (imsegm.utilities.read_zvi.ZviItemTuple attribute) _load_data() (imsegm.utilities.experiments.Experiment method) _make() (imsegm.utilities.read_zvi.ImageTuple class method) (imsegm.utilities.read_zvi.ZviImageTuple class method) (imsegm.utilities.read_zvi.ZviItemTuple class method) _perform() (imsegm.utilities.experiments.Experiment method) _replace() (imsegm.utilities.read_zvi.ImageTuple method) (imsegm.utilities.read_zvi.ZviImageTuple method) (imsegm.utilities.read_zvi.ZviItemTuple method) _source (imsegm.utilities.read_zvi.ImageTuple attribute) (imsegm.utilities.read_zvi.ZviImageTuple attribute) (imsegm.utilities.read_zvi.ZviItemTuple attribute) _summarise() (imsegm.utilities.experiments.Experiment method) A add_overlap_ellipse() (in module imsegm.ellipse_fitting) add_padding() (in module imsegm.utilities.data_io) adjust_bounding_box_crop() (in module imsegm.descriptors) ANNOT_DROSOPHILA_DISC (in module imsegm.utilities.data_samples) ANNOT_DROSOPHILA_OVARY_2D (in module imsegm.utilities.data_samples) ANNOT_SLICE_DIST_TOL (in module imsegm.annotation) append_final_stat() (in module imsegm.utilities.experiments) Array (imsegm.utilities.read_zvi.ImageTuple property) assign_label_by_max() (in module imsegm.labeling) assign_label_by_threshold() (in module imsegm.labeling) assume_bg_on_boundary() (in module imsegm.labeling) B balance_dataset_by_() (in module imsegm.classification) binary_image_from_coords() (in module imsegm.labeling) C CLASSIF_NAME (in module imsegm.pipelines) closest_point_on_line() (in module imsegm.utilities.drawing) CLUSTER_METHOD (in module imsegm.pipelines) COLUMNS_COORDS (in module imsegm.utilities.data_io) COLUMNS_POSITION (in module imsegm.annotation) COLUMNS_POSITION_EGG_ANNOT (in module imsegm.utilities.drawing) compose_dict_label_features() (in module imsegm.classification) compute_boundary_distances() (in module imsegm.labeling) compute_centre_moment_points() (in module imsegm.region_growing) compute_classif_metrics() (in module imsegm.classification) compute_classif_stat_segm_annot() (in module imsegm.classification) compute_color2d_superpixels_features() (in module imsegm.pipelines) compute_cumulative_distrib() (in module imsegm.region_growing) compute_data_costs_points() (in module imsegm.region_growing) compute_distance_map() (in module imsegm.labeling) compute_edge_model() (in module imsegm.graph_cuts) compute_edge_weights() (in module imsegm.graph_cuts) compute_image2d_color_statistic() (in module imsegm.descriptors) compute_image3d_gray_statistic() (in module imsegm.descriptors) compute_img_filter_response2d() (in module imsegm.descriptors) compute_img_filter_response3d() (in module imsegm.descriptors) compute_label_hist_proba() (in module imsegm.descriptors) compute_label_hist_segm() (in module imsegm.descriptors) compute_label_histograms_positions() (in module imsegm.descriptors) compute_labels_overlap_matrix() (in module imsegm.labeling) compute_metric_fpfn_tpfn() (in module imsegm.classification) compute_metric_tpfp_tpfn() (in module imsegm.classification) compute_multivarian_otsu() (in module imsegm.graph_cuts) compute_object_shapes() (in module imsegm.region_growing) compute_pairwise_cost() (in module imsegm.graph_cuts) compute_pairwise_cost_from_transitions() (in module imsegm.graph_cuts) compute_pairwise_penalty() (in module imsegm.region_growing) compute_ray_features_positions() (in module imsegm.descriptors) compute_ray_features_segm_2d() (in module imsegm.descriptors) compute_ray_features_segm_2d_vectors() (in module imsegm.descriptors) compute_rg_crit() (in module imsegm.region_growing) compute_segm_object_shape() (in module imsegm.region_growing) compute_segm_prob_fg() (in module imsegm.region_growing) compute_selected_features_color2d() (in module imsegm.descriptors) compute_selected_features_gray2d() (in module imsegm.descriptors) compute_selected_features_gray3d() (in module imsegm.descriptors) compute_selected_features_img2d() (in module imsegm.descriptors) compute_shape_prior_table_cdf() (in module imsegm.region_growing) compute_spatial_dist() (in module imsegm.graph_cuts) compute_stat_per_image() (in module imsegm.classification) compute_texture_desc_lm_img2d_clr() (in module imsegm.descriptors) compute_texture_desc_lm_img3d_val() (in module imsegm.descriptors) compute_tp_tn_fp_fn() (in module imsegm.classification) compute_unary_cost() (in module imsegm.graph_cuts) compute_update_shape_costs_points_close_mean_cdf() (in module imsegm.region_growing) compute_update_shape_costs_points_table_cdf() (in module imsegm.region_growing) CONFIG_YAML (in module imsegm.utilities.experiments) contour_binary_map() (in module imsegm.labeling) contour_coords() (in module imsegm.labeling) convert_dict_label_features_2_vectors() (in module imsegm.classification) convert_img_2_nifti_gray() (in module imsegm.utilities.data_io) convert_img_2_nifti_rgb() (in module imsegm.utilities.data_io) convert_img_color_from_rgb() (in module imsegm.utilities.data_io) convert_img_color_to_rgb() (in module imsegm.utilities.data_io) convert_img_colors_to_labels() (in module imsegm.annotation) convert_img_colors_to_labels_reverted() (in module imsegm.annotation) convert_img_labels_to_colors() (in module imsegm.annotation) convert_nifti_2_img() (in module imsegm.utilities.data_io) convert_segms_2_list() (in module imsegm.labeling) convert_set_features_labels_2_dataset() (in module imsegm.classification) Count (imsegm.utilities.read_zvi.ZviImageTuple property) (imsegm.utilities.read_zvi.ZviItemTuple property) count_label_transitions_connected_segments() (in module imsegm.graph_cuts) CPU_COUNT (in module imsegm.utilities.experiments) create_classif_search() (in module imsegm.classification) create_classif_search_train_export() (in module imsegm.classification) create_classifiers() (in module imsegm.classification) create_clf_param_search_distrib() (in module imsegm.classification) create_clf_param_search_grid() (in module imsegm.classification) create_clf_pipeline() (in module imsegm.classification) create_experiment_folder() (in module imsegm.utilities.experiments) create_figure_by_image() (in module imsegm.utilities.drawing) create_filter_bank_lm_2d() (in module imsegm.descriptors) create_pairwise_matrix() (in module imsegm.graph_cuts) create_pairwise_matrix_specif() (in module imsegm.graph_cuts) create_pairwise_matrix_uniform() (in module imsegm.graph_cuts) create_pipeline_neuron_net() (in module imsegm.classification) create_subfolders() (in module imsegm.utilities.experiments) criterion() (imsegm.ellipse_fitting.EllipseModelSegm method) CROSS_VAL_LEAVE_OUT (in module imsegm.pipelines) CrossValidate (class in imsegm.classification) CrossValidateGroups (class in imsegm.classification) cut_object() (in module imsegm.utilities.data_io) cython_img2d_color_energy() (in module imsegm.descriptors) cython_img2d_color_mean() (in module imsegm.descriptors) cython_img2d_color_std() (in module imsegm.descriptors) cython_img3d_gray_energy() (in module imsegm.descriptors) cython_img3d_gray_mean() (in module imsegm.descriptors) cython_img3d_gray_std() (in module imsegm.descriptors) cython_label_hist_seg2d() (in module imsegm.descriptors) cython_ray_features_seg2d() (in module imsegm.descriptors) D DEFAULT_CLASSIF_NAME (in module imsegm.classification) DEFAULT_CLUSTERING (in module imsegm.classification) DEFAULT_FILTERS_SIGMAS (in module imsegm.descriptors) DEFAULT_GC_ITERATIONS (in module imsegm.graph_cuts) Depth (imsegm.utilities.read_zvi.ImageTuple property) (imsegm.utilities.read_zvi.ZviImageTuple property) (imsegm.utilities.read_zvi.ZviItemTuple property) DICT_COLOURS (in module imsegm.annotation) DICT_CONVERT_COLOR_FROM_RGB (in module imsegm.utilities.data_io) DICT_CONVERT_COLOR_TO_RGB (in module imsegm.utilities.data_io) DICT_LABEL_MARKER (in module imsegm.utilities.drawing) DICT_SCORING (in module imsegm.classification) down_sample_dict_features_kmean() (in module imsegm.classification) down_sample_dict_features_random() (in module imsegm.classification) down_sample_dict_features_unique() (in module imsegm.classification) draw_color_labeling() (in module imsegm.utilities.drawing) draw_eggs_ellipse() (in module imsegm.utilities.drawing) draw_eggs_rectangle() (in module imsegm.utilities.drawing) draw_graphcut_unary_cost_segments() (in module imsegm.utilities.drawing) draw_graphcut_weighted_edges() (in module imsegm.utilities.drawing) draw_image_clusters_centers() (in module imsegm.utilities.drawing) draw_image_segm_points() (in module imsegm.utilities.drawing) draw_rg2sp_results() (in module imsegm.utilities.drawing) E ellipse() (in module imsegm.utilities.drawing) ellipse_perimeter() (in module imsegm.utilities.drawing) EllipseModelSegm (class in imsegm.ellipse_fitting) enforce_center_labels() (in module imsegm.region_growing) estim_class_model() (in module imsegm.graph_cuts) estim_class_model_gmm() (in module imsegm.graph_cuts) estim_class_model_kmeans() (in module imsegm.graph_cuts) estim_gmm_params() (in module imsegm.graph_cuts) estim_model_classes_group() (in module imsegm.pipelines) eval_classif_cross_val_roc() (in module imsegm.classification) eval_classif_cross_val_scores() (in module imsegm.classification) Experiment (class in imsegm.utilities.experiments) export_image() (in module imsegm.utilities.data_io) export_results_clf_search() (in module imsegm.classification) extend_list_params() (in module imsegm.utilities.experiments) F feature_scoring_selection() (in module imsegm.classification) FEATURES_SET_ALL (in module imsegm.descriptors) FEATURES_SET_COLOR (in module imsegm.descriptors) FEATURES_SET_TEXTURE (in module imsegm.descriptors) FEATURES_SET_TEXTURE_SHORT (in module imsegm.descriptors) figure_annot_slic_histogram_labels() (in module imsegm.utilities.drawing) figure_ellipse_fitting() (in module imsegm.utilities.drawing) figure_image_adjustment() (in module imsegm.utilities.drawing) figure_image_segm_centres() (in module imsegm.utilities.drawing) figure_image_segm_results() (in module imsegm.utilities.drawing) figure_overlap_annot_segm_image() (in module imsegm.utilities.drawing) figure_ray_feature() (in module imsegm.utilities.drawing) figure_rg2sp_debug_complete() (in module imsegm.utilities.drawing) figure_segm_boundary_dist() (in module imsegm.utilities.drawing) figure_segm_graphcut_debug() (in module imsegm.utilities.drawing) figure_used_samples() (in module imsegm.utilities.drawing) FILE_LOGS (in module imsegm.utilities.experiments) FileName (imsegm.utilities.read_zvi.ZviImageTuple property) (imsegm.utilities.read_zvi.ZviItemTuple property) filter_boundary_points() (in module imsegm.ellipse_fitting) find_files_match_names_across_dirs() (in module imsegm.utilities.data_io) FORMAT_DT (in module imsegm.utilities.experiments) FTS_SET_SIMPLE (in module imsegm.pipelines) G GC_REPLACE_INF (in module imsegm.region_growing) get_dir() (in module imsegm.utilities.read_zvi) get_hex() (in module imsegm.utilities.read_zvi) get_image2d_boundary_color() (in module imsegm.utilities.data_io) get_image_path() (in module imsegm.utilities.data_samples) get_layer_count() (in module imsegm.utilities.read_zvi) get_nb_workers() (in module imsegm.utilities.experiments) get_neighboring_candidates() (in module imsegm.region_growing) get_neighboring_segments() (in module imsegm.superpixels) get_segment_diffs_2d_conn4() (in module imsegm.superpixels) get_segment_diffs_3d_conn6() (in module imsegm.superpixels) get_slic_points_labels() (in module imsegm.ellipse_fitting) get_vertexes_edges() (in module imsegm.graph_cuts) group_images_frequent_colors() (in module imsegm.annotation) H Height (imsegm.utilities.read_zvi.ImageTuple property) (imsegm.utilities.read_zvi.ZviImageTuple property) (imsegm.utilities.read_zvi.ZviItemTuple property) HIST_CIRCLE_DIAGONALS (in module imsegm.descriptors) histogram_regions_labels_counts() (in module imsegm.labeling) histogram_regions_labels_norm() (in module imsegm.labeling) HoldOut (class in imsegm.classification) I i32() (in module imsegm.utilities.read_zvi) Image (imsegm.utilities.read_zvi.ZviItemTuple property) IMAGE_3CLS (in module imsegm.utilities.data_samples) image_color_2_labels() (in module imsegm.annotation) IMAGE_DROSOPHILA_DISC (in module imsegm.utilities.data_samples) IMAGE_DROSOPHILA_OVARY_2D (in module imsegm.utilities.data_samples) IMAGE_DROSOPHILA_OVARY_3D (in module imsegm.utilities.data_samples) image_frequent_colors() (in module imsegm.annotation) IMAGE_HISTOL_CIMA (in module imsegm.utilities.data_samples) IMAGE_HISTOL_FLAGSHIP (in module imsegm.utilities.data_samples) image_inpaint_pixels() (in module imsegm.annotation) IMAGE_LANGER_ISLET (in module imsegm.utilities.data_samples) IMAGE_LENNA (in module imsegm.utilities.data_samples) IMAGE_OBJECTS (in module imsegm.utilities.data_samples) image_open() (in module imsegm.utilities.data_io) IMAGE_SPACING (in module imsegm.superpixels) IMAGE_STAR (in module imsegm.utilities.data_samples) image_subtract_gauss_smooth() (in module imsegm.descriptors) ImageDimensionError ImageTuple (class in imsegm.utilities.read_zvi) imsegm module imsegm.annotation module imsegm.classification module imsegm.descriptors module imsegm.ellipse_fitting module imsegm.graph_cuts module imsegm.labeling module imsegm.pipelines module imsegm.region_growing module imsegm.superpixels module imsegm.utilities module imsegm.utilities.data_io module imsegm.utilities.data_samples module imsegm.utilities.drawing module imsegm.utilities.experiments module imsegm.utilities.read_zvi module insert_gc_debug_images() (in module imsegm.graph_cuts) interpolate_ray_dist() (in module imsegm.descriptors) io_image_decorate() (in module imsegm.utilities.data_io) io_imread() (in module imsegm.utilities.data_io) io_imsave() (in module imsegm.utilities.data_io) is_iterable() (in module imsegm.utilities.experiments) L Layers (imsegm.utilities.read_zvi.ZviImageTuple property) (imsegm.utilities.read_zvi.ZviItemTuple property) LIST_ALL_IMAGES (in module imsegm.utilities.data_samples) load_classifier() (in module imsegm.classification) load_complete_image_folder() (in module imsegm.utilities.data_io) load_config_yaml() (in module imsegm.utilities.experiments) load_image() (in module imsegm.utilities.data_io) (in module imsegm.utilities.read_zvi) load_image_2d() (in module imsegm.utilities.data_io) load_image_tiff_volume() (in module imsegm.utilities.data_io) load_images_list() (in module imsegm.utilities.data_io) load_img_double_band_split() (in module imsegm.utilities.data_io) load_info_group_by_slices() (in module imsegm.annotation) load_landmarks_csv() (in module imsegm.utilities.data_io) load_landmarks_txt() (in module imsegm.utilities.data_io) load_params_from_txt() (in module imsegm.utilities.data_io) load_sample_image() (in module imsegm.utilities.data_samples) load_tiff_volume_split_double_band() (in module imsegm.utilities.data_io) load_zvi_volume_double_band_split() (in module imsegm.utilities.data_io) M m_PluginCLSID (imsegm.utilities.read_zvi.ZviImageTuple property) make_edge_filter2d() (in module imsegm.descriptors) make_gaussian_filter1d() (in module imsegm.descriptors) make_graph_segm_connect_grid2d_conn4() (in module imsegm.superpixels) make_graph_segm_connect_grid3d_conn6() (in module imsegm.superpixels) make_graph_segment_connect_edges() (in module imsegm.superpixels) make_overlap_images_chess() (in module imsegm.utilities.drawing) make_overlap_images_optical() (in module imsegm.utilities.drawing) mask_segm_labels() (in module imsegm.labeling) MAX_FIGURE_SIZE (in module imsegm.ellipse_fitting) MAX_PAIRWISE_COST (in module imsegm.graph_cuts) MAX_SIGNAL_RESPONSE (in module imsegm.descriptors) MAX_UNARY_PROB (in module imsegm.region_growing) merge_image_channels() (in module imsegm.utilities.data_io) merge_object_masks() (in module imsegm.utilities.drawing) merge_probab_labeling_2d() (in module imsegm.labeling) METRIC_AVERAGES (in module imsegm.classification) METRIC_SCORING (in module imsegm.classification) MIN_ELLIPSE_DAIM (in module imsegm.ellipse_fitting) MIN_MAX_EDGE_WEIGHT (in module imsegm.graph_cuts) MIN_SHAPE_PROB (in module imsegm.region_growing) MIN_UNARY_PROB (in module imsegm.graph_cuts) module imsegm imsegm.annotation imsegm.classification imsegm.descriptors imsegm.ellipse_fitting imsegm.graph_cuts imsegm.labeling imsegm.pipelines imsegm.region_growing imsegm.superpixels imsegm.utilities imsegm.utilities.data_io imsegm.utilities.data_samples imsegm.utilities.drawing imsegm.utilities.experiments imsegm.utilities.read_zvi N NAME_CSV_CLASSIF_CV_ROC (in module imsegm.classification) NAME_CSV_CLASSIF_CV_SCORES (in module imsegm.classification) NAME_CSV_FEATURES_SELECT (in module imsegm.classification) NAME_TXT_CLASSIF_CV_AUC (in module imsegm.classification) NAMES_FEATURE_FLAGS (in module imsegm.descriptors) NB_WORKERS (in module imsegm.pipelines) NB_WORKERS_SERACH (in module imsegm.classification) neighbour_connect4() (in module imsegm.labeling) norm_aplha() (in module imsegm.utilities.drawing) norm_features() (in module imsegm.descriptors) numpy_img2d_color_energy() (in module imsegm.descriptors) numpy_img2d_color_mean() (in module imsegm.descriptors) numpy_img2d_color_median() (in module imsegm.descriptors) numpy_img2d_color_std() (in module imsegm.descriptors) numpy_img3d_gray_energy() (in module imsegm.descriptors) numpy_img3d_gray_mean() (in module imsegm.descriptors) numpy_img3d_gray_median() (in module imsegm.descriptors) numpy_img3d_gray_std() (in module imsegm.descriptors) numpy_ray_features_seg2d() (in module imsegm.descriptors) O object_segmentation_graphcut_pixels() (in module imsegm.region_growing) object_segmentation_graphcut_slic() (in module imsegm.region_growing) Others (imsegm.utilities.read_zvi.ZviImageTuple property) (imsegm.utilities.read_zvi.ZviItemTuple property) P parse_annot_rectangles() (in module imsegm.utilities.drawing) parse_image() (in module imsegm.utilities.read_zvi) PATH_IMAGES (in module imsegm.utilities.data_samples) pipe_color2d_slic_features_model_graphcut() (in module imsegm.pipelines) pipe_gray3d_slic_features_model_graphcut() (in module imsegm.pipelines) PIXEL_FORMAT (imsegm.utilities.read_zvi.ImageTuple property) (imsegm.utilities.read_zvi.ZviImageTuple property) (imsegm.utilities.read_zvi.ZviItemTuple property) PixelWidth (imsegm.utilities.read_zvi.ImageTuple property) prepare_boundary_points_close() (in module imsegm.ellipse_fitting) prepare_boundary_points_ray_dist() (in module imsegm.ellipse_fitting) prepare_boundary_points_ray_edge() (in module imsegm.ellipse_fitting) prepare_boundary_points_ray_join() (in module imsegm.ellipse_fitting) prepare_boundary_points_ray_mean() (in module imsegm.ellipse_fitting) prepare_graphcut_variables() (in module imsegm.region_growing) Q quantize_image_nearest_color() (in module imsegm.annotation) quantize_image_nearest_pixel() (in module imsegm.annotation) R ransac_segm() (in module imsegm.ellipse_fitting) read_image_container_content() (in module imsegm.utilities.read_zvi) read_item_storage_content() (in module imsegm.utilities.read_zvi) read_struct() (in module imsegm.utilities.read_zvi) reconstruct_ray_features_2d() (in module imsegm.descriptors) reduce_close_points() (in module imsegm.descriptors) region_growing_shape_slic_graphcut() (in module imsegm.region_growing) region_growing_shape_slic_greedy() (in module imsegm.region_growing) relabel_by_dict() (in module imsegm.labeling) relabel_max_overlap_merge() (in module imsegm.labeling) relabel_max_overlap_unique() (in module imsegm.labeling) relabel_sequential() (in module imsegm.classification) RESULTS_TXT (in module imsegm.utilities.experiments) RG2SP_THRESHOLDS (in module imsegm.region_growing) ROUND_UNIQUE_FTS_DIGITS (in module imsegm.classification) run() (imsegm.utilities.experiments.Experiment method) S sample_color_image_rand_segment() (in module imsegm.utilities.data_samples) SAMPLE_SEG_NB_CLASSES (in module imsegm.utilities.data_samples) SAMPLE_SEG_SIZE_2D_NORM (in module imsegm.utilities.data_samples) SAMPLE_SEG_SIZE_2D_SMALL (in module imsegm.utilities.data_samples) SAMPLE_SEG_SIZE_3D_SMALL (in module imsegm.utilities.data_samples) sample_segment_vertical_2d() (in module imsegm.utilities.data_samples) sample_segment_vertical_3d() (in module imsegm.utilities.data_samples) save_classifier() (in module imsegm.classification) save_config_yaml() (in module imsegm.utilities.experiments) save_landmarks_csv() (in module imsegm.utilities.data_io) save_landmarks_txt() (in module imsegm.utilities.data_io) scale_image_intensity() (in module imsegm.utilities.data_io) scale_image_size() (in module imsegm.utilities.data_io) scale_image_vals_in_range() (in module imsegm.utilities.data_io) Scaling (imsegm.utilities.read_zvi.ZviImageTuple property) (imsegm.utilities.read_zvi.ZviItemTuple property) search_params_cut_down_max_nb_iter() (in module imsegm.classification) segm_labels_assignment() (in module imsegm.labeling) segment_color2d_slic_features_model_graphcut() (in module imsegm.pipelines) segment_graph_cut_general() (in module imsegm.graph_cuts) segment_slic_img2d() (in module imsegm.superpixels) segment_slic_img3d_gray() (in module imsegm.superpixels) sequence_labels_merge() (in module imsegm.labeling) set_experiment_logger() (in module imsegm.utilities.experiments) shift_ray_features() (in module imsegm.descriptors) SHORT_FILTERS_SIGMAS (in module imsegm.descriptors) shuffle_features_labels() (in module imsegm.classification) SIZE_CHESS_FIELD (in module imsegm.utilities.drawing) split_segm_background_foreground() (in module imsegm.ellipse_fitting) string_dict() (in module imsegm.utilities.experiments) STRUC_ELEM_BG (in module imsegm.ellipse_fitting) STRUC_ELEM_FG (in module imsegm.ellipse_fitting) superpixel_centers() (in module imsegm.superpixels) swap_coord_x_y() (in module imsegm.utilities.data_io) T TEMPLATE_NAME_CLF (in module imsegm.classification) train_classif_color2d_slic_features() (in module imsegm.pipelines) transform_rays_model_cdf_histograms() (in module imsegm.region_growing) transform_rays_model_cdf_kmeans() (in module imsegm.region_growing) transform_rays_model_cdf_mixture() (in module imsegm.region_growing) transform_rays_model_cdf_spectral() (in module imsegm.region_growing) transform_rays_model_sets_mean_cdf_kmeans() (in module imsegm.region_growing) transform_rays_model_sets_mean_cdf_mixture() (in module imsegm.region_growing) try_decorator() (in module imsegm.utilities.experiments) U unique_image_colors() (in module imsegm.annotation) unique_rows() (in module imsegm.classification) update_path() (in module imsegm.utilities.data_io) update_shape_costs_points() (in module imsegm.region_growing) V ValidBitsPerPixel (imsegm.utilities.read_zvi.ImageTuple property) (imsegm.utilities.read_zvi.ZviImageTuple property) (imsegm.utilities.read_zvi.ZviItemTuple property) Version (imsegm.utilities.read_zvi.ImageTuple property) (imsegm.utilities.read_zvi.ZviImageTuple property) (imsegm.utilities.read_zvi.ZviItemTuple property) W Width (imsegm.utilities.read_zvi.ImageTuple property) (imsegm.utilities.read_zvi.ZviImageTuple property) (imsegm.utilities.read_zvi.ZviItemTuple property) WrapExecuteSequence (class in imsegm.utilities.experiments) wrapper_compute_color2d_slic_features_labels() (in module imsegm.pipelines) Z zvi_read() (in module imsegm.utilities.read_zvi) ZviImageTuple (class in imsegm.utilities.read_zvi) ZviItemTuple (class in imsegm.utilities.read_zvi)